Still searching OHFJR, turns out there are two fuses that govern the windshield.
Torch on the Euro board is electrician supreme, so here's a old post where he explains shield function ( another owner had a non functioning screen, dealer thought the motor was burned up )
Quote from Torch on the Euro board.
The windshield gets it's power from the backup fuse and the windshield motor fuse. I suspect the backup fuse is the actual source of power to the motor itself and the windshield fuse is strictly for control power (I say this because while the windshield fuse is only 2 amps, the backup fuse is 10. I can't see needing all that surplus to run the clock and odometer! Also, the backup is unswitched while the windshield fuse is dead with the key off.)
It seems likely that there are two possible components to control the auto-retract feature. First, there must be some sort of voltage sensing to determine when the key is shut off. That is easily done by monitoring the windshield fuse circuit. Second, there must be some sort of limit switch to determine when the windshield is fully lowered to prevent draining the battery. If either of these two components failed, then the system wouldn't work. That is, if the system does not detect the key has been shut off, then it will not proceed to the retraction stage. Alternatively, if the limit switch is stuck then the system would act as though the windshield was already retracted.
From the wiring diagram, both components are probably integral with the windshield motor unit, similar to automotive windshield wiper motors. Both power circuits go directly into the motor unit and the disabling jumper is connected directly to the motor unit. I have not disassembled the motor to have a look inside though.
It is interesting to note the configuration of the windshield control switch. It grounds both the UP and DOWN circuits simultaneously. The motor only operates when one of those wires is UNgrounded. Also, the motor has it's own ground wire, separate from the switch. These two factors suggest that the switch is simply a control circuit and the actual power flowing through the motor is controlled internally and not through the handlebar switch. This in turn could suggest that there are semiconductors involved, internal to the motor unit, and highlights the possibility of voltage sensing failure in the auto retract mode.
Short answer: assuming the wires to the motor are all ok, connectors uncorroded, fuses intact, etc. then the problem likely exists within the motor unit just like the mechanic said.