Kirillian and especially Frailer, what you just said about the symptoms, under load in excess of 110 mph leads me to believe there is an ever so slight primary imbalance in your engine, or at the very least some loose tolerances probably made worse by heavy throttle and bearings (probably crankshaft) slightly out of spec.
I think Frailer is on to something because he says it is worse when load is put on the engine. It stands to reason that as the bearings and their races are spun harder if there is slop this could induce the thumping.
Try this for an experiment, when it thumps at speed, under load or cruising in 5th, note the rpm exactly, as long you are less than about 125 mph, about tops in 4th gear, down-shift from 5th into 4th which should raise the rpms about 750 or so. If the problem gets better, ceases or almost goes away, you have found your problem. Then, in 4th go the same exact rpm as you did in 5th, note the feeling, now drop the rpm's in 4th 750 or so and if the thumping comes back, it may be an isolated secondary harmonic vibration. For that matter, spin the engine at the same rpm in 3rd and 2nd as well, and again note the thumping. If the feeling is identical in 2nd - 5th gear, then for sure it is probably not the drive shaft, or rear drive gears and joints, and probably not the tires and wheels either. If what I am suggesting is true, it makes sense you don't feel it in 2nd - 4th gears because you don't stay in them long enough to notice. The experiment should prove it one way or the other.
If this is a Yamaha assembly quality control problem there has to be more bikes out there with this problem, considering how many tickers and ignition failures I have read about over the past two years. This problem can't be isolated to just a few bikes with a company with that kind of quality track record.
I doubt Yamaha would step up to the plate and fix it because if they did and the media got hold of the conditions in which it occurred a whole slew of safety questions (a-hem the hauling-*** kind, no offense Haulin-Ashe) would arise.
Lastly, as a possible contributor to the problem, I bought two cheap car tires a few years ago, that were ever so slightly out of round, put them on the front of my car and noticed a vibration, thumping about about 75 mph, took them back, spun balanced them and with a screw driver noticed they were both out of round about 1/10 of an inch. My solution, put them on the rear where the vibration is not as noticeable. Going to change all 4 this fall with good tires and I should be fine.
If I find a Leo free safe desolate area I will try the 5th - 2nd gear experiment I suggested, varying rpms and load with my 05 paying close attention to what I feel and let you know what I find.
If there are any German forum members out there who regularly ride the autobahn at these speeds and have or have not noticed this, please, contribute your experience, and theories to this thread.
Sorry for being so long winded, but I like a tough problem, this is a beauty...
:huh: