I called Yamaha today and spoke to a tech named Mitch. According to him, Yamaha has never heard of this issue. When I pointed out all of the cases documented here on the FJR Forum he says something to the effect of "you can't believe anything you read on the net, those guys are all over the map"! Apparently, we are all idiots. He refused to let me send him an e-mail with the photos and would not read any of the Forum posts. Clearly he is not at all interested in seeing any of the evidence.
I asked him if I could get a dealer to look at it and, when they determine that a new wiring harness is warranted, let me have it first, mod it to fix the issue and have the dealer install it. He said no, they cannot install modified hardware. He says all I can do is have the dealer install a new harness. I REALLY do not want to do that as A) I will still have the issue in a year or so, and B) I do not want to take the risk of the dealer screwing up my cruise control (as they will no doubt NOT take responsibility for aftermarket stuff).
I cannot get to the connector to fix it without at least taking the coolant pipe out and the cruise control. Too damn hot here to do all of that now. I will keep riding it and hope for the best and perhaps fix it in the Fall. Maybe I'll get lucky and there will be a recall by then, who knows. ;-(