I got tired of the Check Engine Light showing, and had nothing to do for a few days, so I rode my 2016 FJR1300ES from DFW to Cullman, AL (where I bought it) to get it taken care of.
(I really am not impressed with either of the two Yamaha shops near me.)
This turned into an adventure to share.
First, the folks at D&H Cycle wanted to help. The first thing they said they would try is to reset via pushing buttons on the console. When I got it there, they tried and ... it just did not work. Later in the process ... the mechanic was on the phone with Yamaha tech support in CA and was told that the console reset was available in '14 and '15, but deactivated on the '16 models. On purpose.
I love the guys at D&H, and they did great for me buying the bike, and I will give them kudos for working on the problem full time, this time. But...sigh. First, they got out the electronic black box and connected it to the bike, and to a notebook computer and started having problems. Installed the software from Yamaha and updates and set up connections, but it never connected. After about 3 hours, the first call to Tech Support discovered that - the software/black box does NOT work with a Windows XP notebook.
Bring out a Windows 7 laptop and try again. More screens showing, more highlighted options on the screen - but no connection. More Tech Support. Oh - this Windows 7 computer has never had all the latest updates to Windows installed, and - the black box needs the latest. Updates for a few hours, and give up for the night.
Next day, try again and still no connection. Another call to Tech Support, and they install some software that lets the guy in CA connect to the laptop and control it directly. Uninstall EVERYTHING - and reinstall only 1 set of programs.
And it connects. 7 hours of connection, and 2 minutes to clear the CEL.
Based on the error codes on the bike's electronics, this is what caused the problem: Engine running, sidestand down, hit the kill switch and leave the key on for more than 3 minutes. This seems to trigger something the bike thinks is an engine error. Solution: turn off the engine with the key.
Simple! All I have to do is counteract the 30 years of killing the engine with the kill switch, which, for better on worse, is what I have been doing on every bike I've ever had a kill switch on. Muscle memory is there!
I feel for the mechanic - he spent at least 5 hours on nothing but my bike, and I was not charged a cent. Definitely a 'warranty' problem. I even got a couple of cold sodas handed to me while I was waiting around.
And, the weather was just about as good as it could be for the whole trip.