I did not realize HMark's FJR site was gone. Here is what I originally sent him:
The FJR has the capability to adjust the overall fuel injector map for each individual cylinder right from the dashboard. The procedure is well-documented in the European and Oceanic service manuals, and requires the use of CO measuring instruments.
But the Yamaha decided to lock out this capability in the bikes they shipped to North America. It was a conscious decision: they will tell a dealer how to override the lock-out
if the dealer can prove the need, but it's a big secret from everyone else.
Not any more. This will explain how you can Europeanize (is that a word?) your FJR so you can have it properly serviced at any shop. Or even at home if you have the proper equipment. All you have to do is move one little wire: the Barbarian Jumper (named after the nick of the fellow who first noticed this odd wire that went nowhere.)
The Barbarian Jumper
First, remove the seat and two left sidecovers. As with the dash panels, Yamaha used a variety of fasteners on this job, including Allen head fasteners, push-pin fasteners, and 1/4 turn Philips head fasteners. See your owner's manual for a more complete description of removing each. Don't forget the two underneath the sidecover.
Next, remove the airbox cover. At least all 4 of these are the same 1/4 turn fastener. Unfortunately, the one indicated by the screwdriver is recessed and a PITA.
With the covers out of the way, the ECU is now accessible. Squeeze the black latch on the top of the connector as you pull it out of the ECU.
On the underside of the connector are 3 white bars. Using a fingernail or small screwdriver, push the left one (as pictured) in about 1/32". This unlocks the wires in the connector.
Pin #27 is the 5th from the left on the bottom row. It houses a yellow wire with a red stripe -- 1/2 of the Barbarian Jumper. Carefully remove this wire from the connector. Make sure you have the wire for pin 27 -- the other half of the jumper is only 2 pins away at 29, and we want to leave that half there.
Do
not pull on wires -- if they are pulled even slightly out you will not be able to re-lock the connector. Also, the metal terminal ends are very fragile and difficult to replace if you separate the wire from the terminal. Push the wire out gently as shown in the next picture.
Using a small piece of stiff wire (I used some .030 MIG wire, but a paperclip or safety pin would probably work) gently push up from the ECU side of the connector to lift the wire to pin 27 and the white plug in pin 25. Do not force anything! The metal terminal ends on the wires are fragile and easily damaged. Lift the pin out with tweezers or needlenose pliers.
The plug is small. Very small. And bouncy. It can travel a surprising distance when deflected off the airbox. If you drop it you are in for more fun than a snipe hunt. Do not ask me how I know this. Use tweezers.
Put the plug in pin 27. Put the wire you removed in pin 25. Make sure they are fully seated and then re-lock the connector by pressing the left hand (as pictured) white bar on the top of the connector down until flush (about 1/32") It does not take a lot of force, so if it doesn't want to go you probably have a wire pulled slightly out. Make sure all the wires in the left 1/3 of the connector are fully seated and try again.
When you are all done, insert the connector into the ECU until the latch clicks. If you did it right, it should look like this now.