I'm at Hycle's. The pads are out, calipers cleaned. Cleaned up the area too. I'll upload pictures when I have wifi (currently under a really nice canopy Hycle set up over my FJR!) as I'm tethering using my phone.
Hycle has a fancy thingy and doesn't think the rotors are warped. Yes, the one is discolored (brake lever side), there was also a lot of what looked like gravel debris in the rotor holes. When I removed the brake pads there was a lot of that debris and brake dust. The pads are really glazed over. I've scuffed up the rotors as well as I can (I owe a new sanding pad).
Brodie, Yes, motor was off. It somewhat annoyed me that I had to leave the key on for the 4-way. My phone was also down to 17% battery and I was charging it. I left that out as I wasn't thinking about it. So, factory reconditioned has been shipped from Shorai. That's coming free of charge, including the shipping here and back!
EBC rotos; I'll look those up. Galfer, tempting if I need them from Cycle Gear...of course they're an "Online Order" only option. Salvage yard, I could call them during a break tomorrow.
I'm still kinda shocked (because I don't know the place) that Roseville wouldn't at least drop the rotor price a little. He said what I was about to pay is better than his employee discount. I guess I didn't think too much about it because I order my small bits from my local dealer. Not schilling for them, but check out rotor prices on www.partsfish.com -- I even called to make sure that wasn't a mistake in pricing. He said "nope, but I can't have them dropped shipped" They would have to receive them and turn around and ship them.
Once I post up the rotor pics I'll let y'all pick over them and tell me what I should order. Hycle knows a local bike shop and they said they'd charge $100 to swap rotors, and they know that it's a challenge.