But in several strings on front end noise a few members changed to roller bearings in the front steering head and talked about the poor quality of the stock ball bearings that yamaha built the bike with. ....
So my inquiry now is to those that have changed their steering head bearings form the Yamaha stock ball bearings to aftermarket roller bearings. Have their newly installed roller bearings, once properly torqued, fixed their front end shake and or clunking noise issues?
If there is "clunking" then there is a problem somewhere in the front end. It is likely something loose or worn and as you note this may or may not be the steering head bearings.
Regardless of what bearing you are using (ball bearing or taper bearing) there should be NO clunking comeing from the steering head bearings. If there is then the problem is not the type of bearing, but the maintenance and adjustment. So switching to taper bearings to fix a clunk is NOT the way to fix this problem.
If you are concerned about this get a shop manual, the special tool used to adjust the steering head bearings and a torque wrench. Then go and adjust them following the instructions in the manual. This has got NOTHING to do with what type of bearing you are using. If they are clunking then they are either worn or misadjusted. And very likely it was a misadjustment that caused them to wear so badly in the first place.
Now; if you are concerned about premature wear and avoiding a future problem. (Or fixing a damaged bearing) then I can see how you might want to try the tapper bearings. The advantage (AFAIK) to taper bearings is that the larger surface area allows them to deal with heavier loads. The downside (AFAIK) is slightly more drag due to the larger surface area.
It should be noted that extremely hard and frequent impacts to the front end can damage the bearings. Slamming on the brakes is not an impact load. Hitting a large pothole is (or hard landings from frequent wheelies) In this case Taper bearings might give you a bit more life.
But.... FWIW: I am no stunt rider, however the front wheel usually lifts off the ground a couple times a week.

And the roads up here are for sh?t due to the winter wear and tear, frost heaves and salt. Point is, I do drive
aggresively with enthusiasm and the bike is ridden hard. Yet the OEM bearings are still running fine. With proper maintenance the stock bearings will last and won't clunk.
In years past on other bikes I used to simply adjust the bearings by "feel" since the manuals did not have a clear easy to follow procedure like the FJR manual has. As such I was replacing steering head bearings every 50,000 miles or so (taper or rollor bearings). The instructions in the FJR shop manual are very specific and easy to follow. You can get the perfect torque applied to the bearings every single time. There is no need to develop a "feel" for what the right torque is.
On this bike I have over 60,000 miles on the original stock OEM roller bearings and they are still in grade A shape. Of course I take the time to maintain the bike and dont wait for problems to occur. Once a year (which works out to every 15,000 miles or so for me) I pull the front end completely apart. Clean all the old grease from the races and bearings, inspect, regrease and reassemble.
Even when the stock bearings wear out I intend to replace with OEM bearings again. One of the things that impressed me about the bike when I first got it was how light the steering was compared to my previous rides. I dont want to change anything that would hinder that light-precise feel the bike has.
- Colin